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Get Started

FROGS Core

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Galaxy

  • Get Started ▾
    • Overview of the Galaxy platform
    • Accessing the platform
    • The Galaxy Interface Layout
    • Uploading your data
    • The tool interface
    • Running an analysis
    • Managing your histories
    • Saving, sharing, and exporting your work
    • Building workflows from your histories
    • Best practices for stable analyses
  • Main tools
  • Reads processing
  • Remove chimera
  • Cluster/ASV filters
  • Taxonomic affiliation
  • Phylogenetic tree building
  • ITSx
  • Optional tools
  • Read demultiplexing
  • Affiliatio filters
  • Affiliation postprocessing
  • Abundance normalisation
  • Convert Biom file to TSV file
  • Convert TSV file to Biom file
  • Cluster/ASV report
  • Affiliation report
Logo galaxy

CLI

  • Get Started
  • Main tools
  • Reads processing
  • Remove chimera
  • Cluster/ASV filters
  • Taxonomic affiliation
  • Phylogenetic tree building
  • ITSx
  • Optional tools
  • Read demultiplexing
  • Affiliation filters
  • Affiliation postprocessing
  • Abundance normalisation
  • Convert Biom file to TSV file
  • Convert TSV file to Biom file
  • Cluster/ASV report
  • Affiliation report

FROGS Stat FROGS Func

Demultiplex reads

Tuto

⚙️ Tutorial — Under construction
République Française

Useful Links

  • Install FROGS via Conda
  • Install FROGS via Galaxy Toolshed
  • Course registration
  • Contact

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