FROGS Core
Galaxy
- Get Started ▾
- Reads processing
- Remove chimera
- Cluster/ASV filters
- Taxonomic affiliation
- Phylogenetic tree building
- ITSx
- Read demultiplexing
- Affiliatio filters
- Affiliation postprocessing
- Abundance normalisation
- Convert Biom file to TSV file
- Convert TSV file to Biom file
- Cluster/ASV report
- Affiliation report
Main tools
Optional tools
CLI
- Get Started
- Reads processing
- Remove chimera
- Cluster/ASV filters
- Taxonomic affiliation
- Phylogenetic tree building
- ITSx
- Read demultiplexing
- Affiliation filters
- Affiliation postprocessing
- Abundance normalisation
- Convert Biom file to TSV file
- Convert TSV file to Biom file
- Cluster/ASV report
- Affiliation report
Main tools
Optional tools
FROGS Core
Welcome to the FROGS Core tutorials!
FROGS Core is a powerful suite of tools for processing amplicon sequencing data — from raw reads to high-quality ASVs.
In this section, you’ll learn how to use FROGS on different platforms (Galaxy and command line) and explore its main tools for preprocessing, cleaning, clustering, and taxonomic affiliation.
You’ll also discover optional modules for ITS region extraction, abundance normalization, and ASV phylogenetic tree construction, as well as utilities for statistics generation and file conversion.
Follow these step-by-step guides to make the most of FROGS and strengthen your bioinformatics analyses.